Index

B

bundle_client_args() (in module sagetasks.sevenbridges.general) (in module sagetasks.synapse.general) (sagetasks.nextflowtower.utils.TowerUtils static method) (sagetasks.sevenbridges.utils.SbgUtils static method)

C

close_workspace() (sagetasks.nextflowtower.utils.TowerUtils method) create_folder() (sagetasks.sevenbridges.utils.SbgUtils method)

create_project() (sagetasks.sevenbridges.utils.SbgUtils method) create_task() (sagetasks.sevenbridges.utils.SbgUtils method) create_tasks() (in module sagetasks.sevenbridges.general)

D

dedup() (in module sagetasks.utils)

E

extract_id() (sagetasks.sevenbridges.utils.SbgUtils method)

F

format_rg_val() (in module sagetasks.sevenbridges.inputs)

G

get_billing_group() (sagetasks.sevenbridges.utils.SbgUtils method) get_compute_env() (sagetasks.nextflowtower.utils.TowerUtils method) get_copied_app() (sagetasks.sevenbridges.utils.SbgUtils method) get_copied_app_id() (in module sagetasks.sevenbridges.general) get_copied_app_name() (sagetasks.sevenbridges.utils.SbgUtils method) get_dataframe() (in module sagetasks.synapse.general) get_file() (sagetasks.sevenbridges.utils.SbgUtils method) get_folder() (sagetasks.sevenbridges.utils.SbgUtils method) get_folders_recursively() (sagetasks.sevenbridges.utils.SbgUtils method) get_or_create() (sagetasks.sevenbridges.utils.SbgUtils method) get_or_create_copied_app() (sagetasks.sevenbridges.utils.SbgUtils method) get_or_create_folder() (sagetasks.sevenbridges.utils.SbgUtils method)

get_or_create_project() (sagetasks.sevenbridges.utils.SbgUtils method) get_or_create_task() (sagetasks.sevenbridges.utils.SbgUtils method) get_or_create_volume_file() (sagetasks.sevenbridges.utils.SbgUtils method) get_project() (sagetasks.sevenbridges.utils.SbgUtils method) get_project_id() (in module sagetasks.sevenbridges.general) get_public_app() (sagetasks.sevenbridges.utils.SbgUtils method) get_task() (sagetasks.sevenbridges.utils.SbgUtils method) get_unique_value() (in module sagetasks.sevenbridges.inputs) get_valid_name() (sagetasks.nextflowtower.client.TowerClient method) get_volume() (sagetasks.sevenbridges.utils.SbgUtils method) get_volume_id() (in module sagetasks.sevenbridges.general) get_workflow() (sagetasks.nextflowtower.utils.TowerUtils method)

I

import_app() (sagetasks.sevenbridges.utils.SbgUtils method) import_volume_file() (in module sagetasks.sevenbridges.general) (sagetasks.sevenbridges.utils.SbgUtils method)

init_launch_workflow_data() (sagetasks.nextflowtower.utils.TowerUtils method) init_params() (sagetasks.nextflowtower.utils.TowerUtils method)

L

launch_workflow() (in module sagetasks.nextflowtower.general) (sagetasks.nextflowtower.utils.TowerUtils method)

M

manifest_to_kf_rnaseq_app_inputs_factory() (in module sagetasks.sevenbridges.inputs) module sagetasks sagetasks.main sagetasks.nextflowtower sagetasks.nextflowtower.client sagetasks.nextflowtower.general sagetasks.nextflowtower.typer sagetasks.nextflowtower.utils sagetasks.sevenbridges sagetasks.sevenbridges.general sagetasks.sevenbridges.inputs sagetasks.sevenbridges.prefect sagetasks.sevenbridges.utils sagetasks.synapse sagetasks.synapse.general sagetasks.synapse.prefect sagetasks.utils

O

open_project() (sagetasks.sevenbridges.utils.SbgUtils method)

open_workspace() (sagetasks.nextflowtower.utils.TowerUtils method)

P

paged_request() (sagetasks.nextflowtower.client.TowerClient method)

project (sagetasks.sevenbridges.utils.SbgUtils property)

R

request() (sagetasks.nextflowtower.client.TowerClient method)

S

sagetasks module sagetasks.main module sagetasks.nextflowtower module sagetasks.nextflowtower.client module sagetasks.nextflowtower.general module sagetasks.nextflowtower.typer module sagetasks.nextflowtower.utils module sagetasks.sevenbridges module sagetasks.sevenbridges.general module

sagetasks.sevenbridges.inputs module sagetasks.sevenbridges.prefect module sagetasks.sevenbridges.utils module sagetasks.synapse module sagetasks.synapse.general module sagetasks.synapse.prefect module sagetasks.utils module SbgUtils (class in sagetasks.sevenbridges.utils) store_dataframe() (in module sagetasks.synapse.general)

T

to_prefect_tasks() (in module sagetasks.utils) to_typer_commands() (in module sagetasks.utils)

TowerClient (class in sagetasks.nextflowtower.client) TowerUtils (class in sagetasks.nextflowtower.utils)

U

update_dict() (in module sagetasks.utils)

W

workspace (sagetasks.nextflowtower.utils.TowerUtils property)